C++ implementation of the F-measure computation without the reference class 0

Aghaeepour in FlowCAP 1 ignore the reference class labeled "0"

Usage

FmeasureC_no0(pred, ref)

Arguments

pred

vector of a predicted partition

ref

vector of a reference partition

References

N Aghaeepour, G Finak, H Hoos, TR Mosmann, RR Brinkman, R Gottardo, RH Scheuermann, Critical assessment of automated flow cytometry data analysis techniques, Nature Methods, 10(3):228-38, 2013.

Examples

library(NPflow)
pred <- c(1,1,2,3,2,3)
ref <- c(2,2,0,0,0,3)
FmeasureC(pred, ref)
#> [1] 0.8444444
FmeasureC_no0(pred, ref)
#> [1] 1